Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874389.1_cds_XP_016435469.1_31427
CDS Infomation

[gene=LOC107761724] [db_xref=GeneID:107761724] [protein=probable pectate lyase P59] [protein_id=XP_016435469.1] [location=join(16180..16379,17141..17556,18049..18560,19051..19278)] [gbkey=CDS]
Sequence

ATGGGAGGACCTAAGCTGATAAATTTGTCTCTGTTTCTATTTTCCACTTTTTTGGCTATA
ATTCCAAGCCTAAATGGTCACATTGGTAACTTTGATGAAGTGTGGCGGAGGCGAGCCCAA
GAAGCTGAAGAATGGGCCCTTAAGGCCTATGAGCCCGACCCGGTTAATGTCACCCTTGCT
TTTGCCAAGCAAACTAGGGAGTCAATGAAGGAATTAAAGGAAGTGAACAAGCTATCAACG
AATGAAACAAGGAGGGAATTAAGAGGTTTTCACAAGATATACGCTGGGCCTTGTTTAGTC
ACCAATCCCATTGATAGGTGCTGGAGATGCCAAGGTAATTGGGCCGACAATCGTAAAAGA
TTAGCAGATTGTGCAATGGGCTTCGGTAAAGGGACCACCGGCGGCAAAGCCGGCCAATTC
TACGTCGTCACCGACTCTTCCGACGACAGCAGCAACCCTAAGCCGGGAACCCTACGTCAC
GCTGTCATTCAAAAGGAGCCATTGTGGATCATTTTTGCAAAAAGCATGACCATTAGATTA
CATCAGGAGCTCATAATGCAAAGCGATAAGACCATTGATGGTCGTGGTGTTAACGTTCAT
ATTGCATATGGCGCAGGTATCACCTTACAGTACGTGAAGAACGTGATCATCCATGGTCTC
CACATTCACGACATTGTCGTAGGCAATGGTGGCATGGTCATAAGCGCGGTGGACCATGTC
GGAATAAGGACACAAAGCGATGGAGATGGTATTTCCATATTTGGTTCATCCAATATTTGG
ATTGATCATGTGTCAATGTGGCGTTGTAGTGATGGGCTTATTGATGCTGTGGAGGGATCA
ACTGCTATTACCATATCAAATGGACATTTCACTGATCATAATGAGGTGATGCTTTTTGGT
GCAAGTGACAGTTCTTCAATAGATCAAAGGATGCAAATTACTGTAGCTTTCAATCATTTT
GGAAAGAGATTGGTACAGAGAATGCCAAGGTGCAGATGGGGTTTTATTCATGTTGTTAAC
AATGACTACACTCATTGGAATATGTATGCTATTGGTGGTAGCCAACATCCCACTATTATT
AGCCAGGGCAATCGTTTTATTGCTCCTCCTGACATGTTCAAGAAGGAGATAACAAAGAGG
GATTATGCCCCAGAATCAGTGTGGAAACAGTGGACATGGAGATCACAAGGTGATCTATTC
ATGAATGGAGCATTCTTTGTTGAATCTGGAGATCCAGATTGGACCAAGAAACACCAGAAC
CTTTTTGATGGTATATCATCAGCCCCAGGGGAACAAGTCACTTGGATTACGAGATTTGCA
GGGGCTCTCAATTGCAGGCCAGGACATGCTTGTTAA

Peptide Sequence

PEP ID

XP_016435469.1
PEP Infomation

PREDICTED: probable pectate lyase P59 [Nicotiana tabacum]
Sequence

MGGPKLINLSLFLFSTFLAIIPSLNGHIGNFDEVWRRRAQEAEEWALKAYEPDPVNVTLA
FAKQTRESMKELKEVNKLSTNETRRELRGFHKIYAGPCLVTNPIDRCWRCQGNWADNRKR
LADCAMGFGKGTTGGKAGQFYVVTDSSDDSSNPKPGTLRHAVIQKEPLWIIFAKSMTIRL
HQELIMQSDKTIDGRGVNVHIAYGAGITLQYVKNVIIHGLHIHDIVVGNGGMVISAVDHV
GIRTQSDGDGISIFGSSNIWIDHVSMWRCSDGLIDAVEGSTAITISNGHFTDHNEVMLFG
ASDSSSIDQRMQITVAFNHFGKRLVQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPTII
SQGNRFIAPPDMFKKEITKRDYAPESVWKQWTWRSQGDLFMNGAFFVESGDPDWTKKHQN
LFDGISSAPGEQVTWITRFAGALNCRPGHAC

Transcript Sequence

Gene sequence data has not been registered.